Preprocessing > Domain-related Tools
    Detailing Pattern Set
    Sorting Patterns
    Promotor & TFBS Std.
    Promoter. & TFBS Extr.
    Promoter & TFBS Set
    Sequ. Analysis Format
    Region & Site Extraction
    Info. Extraction
    Domain-related Tools
    Smart Tools
  Domain Extraction

Domain DB Link information

https://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi?INPUT_TYPE=live&SEQUENCE=ID
http://gene3d.biochem.ucl.ac.uk/search?sterm=ID&mode=protein
https://www.ebi.ac.uk/interpro/protein/ID
http://pfam.xfam.org/protein/ID
http://www.supfam.org/SUPERFAMILY/cgi-bin/gene.cgi?genome=up;seqid=ID
https://www.uniprot.org/uniprot/ID
Protein sequence ID:   (UniProtKB ID, accession ID checked)

CDD, Gene3D, InterPro, Pfam, Superfamily, UniProtKB     

 
(Suggested format of file name:  e.g., 2034-Q9H6A9-PDpre01-1008-1112.txt)

 
(input, e.g., 2034-Q9H6A9-PDpre01-1008-1112_Brief.txt)

 
Column index: (Input two files: 1. domain candidates, 2. domain database)
Running results :




These works are currently supported by Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China
Copyright @ 2015 Dr. Jasun Zhang (jasundmbio.info) All rights reserved.
沪ICP备2021016253号 沪公网安备 31011202003413号