Journals |
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Jingsong Zhang, Yang Zhang, Jun-Yan Kang, Shuiye Chen, Yongqun He, Benhao Han, Mo-Fang
Liu, Lina Lu, Li Li, Zhigang Yi and Luonan Chen. Potential transmission chains of
variant B.1.1.7 and co-mutations of SARS-CoV-2. Cell Discovery,
accepted (2021) |
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Jingsong Zhang, Jianmei Guo, Xiaoqing Yu, Xiangtian Yu, Weifeng Guo, Tao Zeng, and
Luonan Chen. Efficiently Mining Multi-mers in a Variety of Biological Sequences.
IEEE ACM Trans. Comput. Biol. Bioinform. (TCBB)
17(3): 949-958 (2020)
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Xiangtian Yu, Jingsong Zhang, Shaoyan Sun, Xin Zhou, Tao Zeng, and Luonan Chen.
Individual-specific edge-network analysis for disease prediction. Nucleic Acids
Research, 2017. |
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Jianmei Guo, Jiahui Liang, Kai Shi, Dingyu Yang, Jingsong Zhang, Krzysztof Czarnecki,
Vijay Ganesh, Huiqun Yu. SMTIBEA: a hybrid multi-objective optimization algorithm
for configuring large constrained software product lines. Software & Systems
Modeling, 2017: 1-20. |
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Weifeng Guo, Shaowu Zhang, Zegang Wei, Tao Zeng, Fei Liu, Jingsong Zhang, Fangxiang
Wu and Luonan Chen. Constrained target controllability of complex networks.
Journal
of Statistical Mechanics: theory and experiment. 2017. |
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Tao Zeng, Wanwei Zhang, Xiangtian Yu, Xiaoping Liu, Meiyi Li and Luonan Chen.
Big-data-based edge biomarkers: study on dynamical drug sensitivity and resistance in individuals. Briefings in bioinformatics, 2015: bbv078. bib, pdf. |
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Xiangtian Yu, Tao Zeng, Xiangdong Wang, Guojun Li and Luonan Chen.
Unravelling personalized dysfunctional gene network of complex diseases based on differential network model. Journal of translational medicine, 2015, 13(1): 1. bib, pdf. |
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Xiangtian Yu, Tao Zeng and Guojun Li.
Integrative enrichment analysis: a new computational method to detect dysregulated pathways in heterogeneous samples. BMC genomics, 2015, 16(1): 1. bib, pdf. |
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Rui Liu, Xiangtian Yu, Xiaoping Liu, Dong Xu, Kazuyuki Aihara and Luonan Chen.
Identifying critical transitions of complex diseases based on a single sample. Bioinformatics, 2014: btu084. bib, pdf. |
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Xiangtian Yu, Guojun Li and Luonan Chen.
Prediction and early diagnosis of complex diseases by edge-network. Bioinformatics, 2014, 30(6): 852-859. bib, pdf. |
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Tao Zeng, Wanwei Zhang, Xiangtian Yu, Xiaoping Liu, Meiyi Li, Rui Liu and Luonan Chen.
Edge biomarkers for classification and prediction of phenotypes. Science China Life Sciences, 2014, 57(11): 1103-1114. bib, pdf. |
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Jingsong Zhang, YinglinWang, Dingyu Yang.
CCSpan: Mining Closed Contiguous Sequential Patterns. Knowledge-Based Systems (KBS),
2015, 89: 1-13. bib, pdf. |
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Jingsong Zhang, Yinglin Wang, Chao Zhang.
Mining Contiguous Sequential Generators in Biological Sequences, IEEE ACM Trans. Comput. Biol. Bioinform. (TCBB),
13(5): 855-867 (2016). bib, pdf. |
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Dingyu Yang, Jian Cao, Sai Wu, Jie Wang. Progressive Online Aggregation in a Distributed
Stream Systems. Journal of Systems and Software(JSS), 2015, 102: 146-157. bib. |
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Dingyu Yang, Jian Cao, Jiwen Fu, JieWang, Jianmei Guo. A pattern fusion model for
multistep-ahead CPU load prediction. Journal of Systems and Software(JSS),
2013, 86(5): 1257-1266. bib. |
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Shiyou Qian, Jian Cao,Yanmin Zhu, Minglu Li, Jie Wang. H-Tree: An Efficient Index Structurefor Event Matching
in Content-Based Publish/Subscribe Systems. IEEE Transactions on Parallel &
Distributed Systems (TPDS), 2015 (6): 1622-1632. bib. |
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Wenbin Cai, Muhan Zhang, Ya Zhang. Active Learning via Noise Injection for Web Search Ranking.
ACM Transactions on the WEB (TWEB), 9(1), 2015. pdf.
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Wenbin Cai, Muhan Zhang, Ya Zhang. Active learning for ranking with sample density.
Information Retrieval Journal (IR), 2015, 18(2): 123-144.bib.pdf. |
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Conferences |
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Jingsong Zhang, Jianmei Guo, Xiaoqing Yu, Xiangtian Yu, Weifeng Guo, Tao Zeng, and
Luonan Chen. Mining K-mers of Various Lengths in Biological Sequences. 13th International
Symposium on Bioinformatics Research and Applications (ISBRA 2017),
2017:186-195.
pdf |
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Jingsong Zhang,Yinglin Wang, Dingyu Yang.
Automatic learning common definitional patterns from multi-domain wikipedia pages.
In 2014 IEEE International Conference on Data Mining Workshop (ICDMW 2014),
2014:251-258.
bib, pdf.
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Jingsong Zhang,Yinglin Wang, Hao Wei.
An interaction framework of service-oriented ontology learning.
In Proceedings of the 21st ACM international conference on Information and knowledge management (CIKM
2012), 2012: 2303-2306.
bib, pdf.
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Dingyu Yang, Dongxiang Zhang, Kian-Lee Tan, Jian Cao, Frederic Le Mouel. CANDS:
Continuous Optimal Navigation via Distributed Stream Processing. Proceedings of
the VLDB Endowment (VLDB 2015), 2015, 8(2): 137-148. bib. pdf.
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Dingyu Yang, Jian Cao. A Scalable Data Warehouse Model Based on Complex Semantic
Event Processing in Distributed Systems. Proceedings of the IEEE 28th International
Conference on Data Engineering Workshop on Data-Driven Decision Support and Guidance
Systems (ICDE DGSS 2012). 2012: 94-97.bib. |
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Shiyou Qian, Jian Cao, Frederic Mouel Le, I. Sahel, and Minglu Li. Scram: A sharing
considered route assignment mechanism for fair taxi route recommendations. Proceedings
of the 21th ACM SIGKDD international conference on Knowledge discovery and data
mining (SIGKDD 2015). ACM, 2015. |
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Shiyou Qian, Jian Cao, Yanmin Zhu, Minglu Li, Jie Wang. REIN: A fast event matching
approach for content-based publish/subscribe systems. INFOCOM,
2014 Proceedings IEEE (INFOCOM 2014). IEEE, 2014: 2058-2066.bib. |
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Shiyou Qian, Yanmin Zhu, Minglu Li. Smart recommendation by mining large-scale GPS
traces. Wireless Communications and Networking Conference (WCNC 2012),
2012 IEEE. IEEE, 2012: 3267-3272.bib. |
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Wenquan Wang, Wenbin Cai, Ya Zhang. Stability-Based Stopping Criterion for
Active Learning. Data Mining (ICDM 2014), 2014 IEEE 14th International Conference
on. IEEE, 2014: 1019-1024.bib.pdf. |
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Wenbin Cai, Ya Zhang, Siyuan Zhou and Wenquan Wang. Active Learning for Support Vector Machines with Maximum Model Change. Machine Learning and Knowledge Discovery
in Databases (ECML-PKDD 2014). Springer Berlin Heidelberg, 2014: 211-226. bib.pdf. |
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Wenbin Cai, Ya Zhang, Siyuan Zhou. Maximizing expected model change for active learning
in regression.Data Mining (ICDM 2013), 2013 IEEE 13th International
Conference on. IEEE, 2013: 51-60. bib.pdf. |
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Wenbin Cai, Ya Zhang. Variance maximization via noise injection for active sampling
in learning to rank. Proceedings of the 21st ACM international conference on Information
and knowledge management (CIKM 2012). ACM, 2012: 1809-1813.bib.pdf. |
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