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Mining Algorithms > CloKmer3
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Biolocical Signatures for species, traints, and complex diseases
Exclusive char:
(
N
for DNA and
X
for protein sequences)
Minimum support:
absolute support
(2 to sequence length)
relative support
(0.000001 to 1)
Select a sequence set:
(Select)
(Upload a sequence set (txt), e.g.
BindingSiteSet_std_sel.txt
)
Column number:
(The column number in dataset, e.g., 0, 1, 2, 3 or others)
Minimum support:
(Ranging from 1 to sequence length)
Error Input ~
% (Ranging from 0.0001 to 100)
Error Input ~
(Coming soon)
Original sequences separated by "#"
Output closed k-mers ( Y:Sole-closed, L:Min-closed, N:Non-closed, M:Max-closed):
Details of dataset and running:
Download the mined pattern set (txt)
Download the running information (txt)
These works are currently supported by Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China
Copyright @ 2015 Dr. Jasun Zhang (jasun
dmbio.info) All rights reserved.
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