Algorithms > MulMer
     CCSpan Algorithm
        CCSpan+ Algorithm
        ConSpan Algorithm
        CCSpm Algorithm
     ConSgen Algorithm
        ConSgen+ Algorithm
     CloKmer Algorithm
        CloKmer2 Algorithm
        CloKmer3 Algorithm
     MulMer Algorithm
        EquiCla Algorithm
     PDpre Algorithm
     Species Evolution
     Tumour Evolution
     Virus Evolution
     Biological Signatures
     Common Tools
     Other Algorithms
  Mining Frequent Multi-mers (k-mers of various lengths) by Inverted Projection
  (MulMer algorithm, see J. Zhang, et al, 2017 for details)

  Select a text file with SAF:
(E.g., Input:  WP_044990988_SAF.txt or BindingSiteSet_std_sel_saf.txt 
         Output: WP_044990988_SAF_2.txt or BindingSiteSet_std_sel_saf_2.txt)

  Input a sequence
Separator: ,
Length constaint:
to   (coming soon)  
Excluded string:  
Minimum support:   (Ranging from 2 to sequence length)  
Output frequent multi-mers ( Y: default value):
Details of dataset and running:
Download the mined multi-mer set (txt)
Download the running information (txt)

These works are currently supported by Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai 200031, China
Copyright @ 2015 Dr. Jasun Zhang ( All rights reserved.
沪ICP备2021016253号-1 沪公网安备 31011202003413号